Background and Purpose: Metabolic syndrome, a disorder of energy utilization and storage, has been found to increase the risk of developing cardiovascular disease and diabetes, yet the adverse effects of metabolic syndrome on male fertility have remained understudied. The study aimed accordingly to explore the associations between metabolic syndrome and male fertility. Methods: Health examination data of 360 male subjects during the six-year period from January 1, 2008 to December 31, 2013 were collected and examined using retrospective chart review. After the removal of personally identifiable information, statistical analysis was performed to trace the links between the components of metabolic syndrome, the factors affecting the syndrome (e.g. age, height, body weight) and semen quality. Results: In terms of semen volume, concentration and motility, no significant difference was observed between subjects with/without metabolic syndrome. However, after adjusting for age, tobacco and alcohol consumption, and use of medicine for hypertension and/or diabetes, the study obtained the statistically significant result that the percentage of sperm normal morphology was lower in the group of subjects with metabolic syndrome. While showing no significant influence on semen concentration, motility and morphology, tobacco consumption emerged to be negatively associated with semen volume. Alcohol consumption, on the other hand, was found to affect sperm morphology. Conclusion: Male subjects with metabolic syndrome demonstrated a lower percentage of sperm normal morphology. Tobacco consumption adversely affected sperm quality. Men with metabolic syndrome may improve their fertility by quitting smoking.