篇名 | Gene-gene interaction analysis of gout arthritis associated regions in Han Chinese |
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作者 | Zhaowei Zhou、Jiawei Shen、Xinde Li、Can Wang、Hui Zhou、Jinjiao Zhao、Zhiqiang Li、Changgui Li、Yongyong Shi |
中文摘要 | |
英文摘要 | 期刊連結:http://www.gouthyperuricemia.org
Objective: Gout is a heterogeneous metabolic disease and is affected by both environmental and genetic factors. The purpose of this study is to investigate the gene-gene (or genetic variants) interactions in gout.
Methods: Possible pairwise genetic variant interactions were explored between three gout associated loci (17q23.2, 9p24.2 and 11p15.5) from our previous genome wide association study (GWAS). A GPU (graphic processing unit)-accelerated version of BOOST (Boolean Operation-based Screening and Testing) was used for detecting gene interactions in a sample of 1,255 male cases and 1,848 male controls.
Results: Three significant pair-way interactions were observed for rs6476874 (9p24.2, solute carrier family 1 member 1, SLC1A1) and rs7225870 (17q23.2, intergenic variant), rs7029249 (9p24.2, intergenic variant) and rs800123 (11p15.5, intergenic variant), and rs231352 (11p15.5, potassium voltage-gated channel subfamily Q member 1, KCNQ1) and rs9902812 (17q23.2, integrator complex subunit 2, INTS2). The p values are 1.46×10-6, 2.07×10-6 and 8.88×10-6, respectively. None survived in the Bonferroni correction for multiple comparisons, but were close to the significance level 5.91×10-7.
Conclusion: These three genetic variant interactions might confer susceptibility to gout. Further investigations are required to validate the findings and explore more genetic variant interactions in the etiology of gout. |
起訖頁 | 46-52 |
關鍵詞 | Gout、Gene-gene interactions、Logistic regression model、Genome wide association study |
刊名 | Gout and Hyperuricemia |
出版單位 | Gout and Hyperuricemia |
期數 | 201606 (3:2期) |
DOI | 10.3966/GH1606030203 複製DOI DOI申請 |
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