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篇名
Gene-gene interaction analysis of gout arthritis associated regions in Han Chinese
作者 Zhaowei ZhouJiawei ShenXinde LiCan WangHui ZhouJinjiao ZhaoZhiqiang LiChanggui LiYongyong Shi
中文摘要
英文摘要
期刊連結:http://www.gouthyperuricemia.org
Objective: Gout is a heterogeneous metabolic disease and is affected by both environmental and genetic factors. The purpose of this study is to investigate the gene-gene (or genetic variants) interactions in gout.
Methods: Possible pairwise genetic variant interactions were explored between three gout associated loci (17q23.2, 9p24.2 and 11p15.5) from our previous genome wide association study (GWAS). A GPU (graphic processing unit)-accelerated version of BOOST (Boolean Operation-based Screening and Testing) was used for detecting gene interactions in a sample of 1,255 male cases and 1,848 male controls.
Results: Three significant pair-way interactions were observed for rs6476874 (9p24.2, solute carrier family 1 member 1, SLC1A1) and rs7225870 (17q23.2, intergenic variant), rs7029249 (9p24.2, intergenic variant) and rs800123 (11p15.5, intergenic variant), and rs231352 (11p15.5, potassium voltage-gated channel subfamily Q member 1, KCNQ1) and rs9902812 (17q23.2, integrator complex subunit 2, INTS2). The p values are 1.46×10-6, 2.07×10-6 and 8.88×10-6, respectively. None survived in the Bonferroni correction for multiple comparisons, but were close to the significance level 5.91×10-7.
Conclusion: These three genetic variant interactions might confer susceptibility to gout. Further investigations are required to validate the findings and explore more genetic variant interactions in the etiology of gout.
起訖頁 46-52
關鍵詞 GoutGene-gene interactionsLogistic regression modelGenome wide association study
刊名 Gout and Hyperuricemia
出版單位 Gout and Hyperuricemia
期數 201606 (3:2期)
DOI 10.3966/GH1606030203  複製DOI  DOI申請
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